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Journal · 101671820

Microbial genomics

2 sourcesjournal-index-2026-11-06-0.2.0

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ConductScience Library. Microbial genomics. Journal index, record 101671820. Release journal-index-2026-11-06-0.2.0, 6 Nov 2026. https://conductscience.org/library/journal-index/101671820

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Journal

Counted by ScienceGraph from its copy of PubMed, by the NLM ID each paper's record states: papers from 1959 on, and no preprints, since until the copy is rebuilt from NLM's own files it holds few of PubMed's papers from before 1959 and about half its preprints.

Title
Microbial genomics
NLM Catalog
NLM ID
101671820
NLM Catalog
Abbreviation
Microb Genom
NLM Catalog
ISO abbreviation
Microb Genom
NLM Catalog
ISSN, online
2057-5858
NLM Catalog
Named by
NLM's journal list
NLM Catalog
Papers since 1959
1,809
PubMed
Years
2015 to 2026
PubMed
Papers from 2021 to 2025
1,091
PubMed
Retracted papers
1
PubMed
Retraction notices
1
PubMed
Errata
41
PubMed
Expressions of concern
0
PubMed
Reviews
47
PubMed
Trials, by publication type
1
PubMed
With a copy in PMC
1,779
PubMed
With NIH grants
147
PubMed
With a ClinicalTrials.gov number
2
PubMed

Years12

Each paper counts in the year of its issue, as its record states. PubMed's search for a year also finds papers that appeared online that year, so its count can be higher. A part year is our copy's own year or later.

YearPapersWith a copy in PMCRetractedWith NIH grantsWith a ClinicalTrials.gov numberSource
2026, part year2732480131PubMed
20252562510220PubMed
20241701700160PubMed
20232492490160PubMed
20221741740140PubMed
20212422421251PubMed
20201541540140PubMed
20197777040PubMed
20189696080PubMed
20174040070PubMed

1 to 10 of 12

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Publication types27

NLM's publication types, as each record states them. A paper can have several.

TypePapersSource
Journal Article1,789PubMed
Research Support, Non-U.S. Gov't1,264PubMed
Research Support, N.I.H., Extramural108PubMed
Research Support, U.S. Gov't, Non-P.H.S.62PubMed
Comparative Study51PubMed
Published Erratum41PubMed
Review39PubMed
Research Support, U.S. Gov't, P.H.S.24PubMed
Editorial15PubMed
Multicenter Study9PubMed

1 to 10 of 27

See all 27 publication types

Retracted papers1

Papers whose PubMed record is typed Retracted Publication, with the notice PubMed links.

PMIDTitleYearRetraction notice
34227932Comparative genomic analysis of Escherichia coli isolates from cases of bovine clinical mastitis identifies nine specific pathotype marker genes.202139699953

Source PubMed

Newest papers20

The twenty newest papers in our copy of PubMed, by year and then PMID.

PMIDTitleYearSource
42993179Characterization of household microbiomes from three unique cities around the world.2026PubMed
42986781SCCmecExtractor: a tool for extracting staphylococcal cassette chromosome elements from whole-genome sequences.2026PubMed
42980127A practical resource for multi-omics data integration in microbial systems.2026PubMed
42975948Benchmarking nanopore-based strategies for antimicrobial resistance prediction.2026PubMed
42975947Whole-genome characterization of Candidozyma auris isolates from a Korean tertiary care centre: clade II predominance, partly unexplained fluconazole resistance and a clade I isolate.2026PubMed
42970341Genomic characterization of Clostridioides (Clostridium) difficile in Cambodia.2026PubMed
42970336System-level constraints on implementing whole-genome sequencing for tuberculosis drug resistance diagnosis in the public health system of São Paulo, Brazil.2026PubMed
42961448Geographic, species and lineage driven antimicrobial resistance patterns in poultry-associated Campylobacter across South and Southeast Asia.2026PubMed
42944735The genomic diversity of Salmonella Enteritidis from poultry and human clinical cases in Israel.2026PubMed
42932221ACCIO: an assembly-based tool enabling plasmid detection.2026PubMed
42911656UShER-TB: scalable, comprehensive, accessible phylogenomic analysis of Mycobacterium tuberculosis.2026PubMed
42909482Genomic diversity, host associations and ecology of Campylobacter jejuni recovered from wild birds in Michigan crop production systems.2026PubMed
42909470Comparative genomics reveals modular virulence repertoires and extensive horizontal gene transfer in Vibrio species associated with white syndrome of Porites cylindrica.2026PubMed
42873652Bile, sulphur and carbohydrate metabolic variation co-occur with host adiposity in mice colonized with primate microbiota.2026PubMed
42862627Members of the Lactococcus-Pseudolactococcus clade exhibit extensive genomic diversity in features associated with phage-host co-adaptation.2026PubMed
42853601Plasmidomics: studying plasmids as ecological entities beyond their hosts.2026PubMed
42842459Uncovering multidrug-resistance genes and potential biomarkers in Klebsiella pneumoniae using pan-genomic machine-learning feature-selection approach.2026PubMed
42842301Genomic global epidemiology and evolution of Escherichia coli ST131 clade A.2026PubMed
42842295Association of microbial pathways predicted/inferred using 16S and shotgun metagenome with faecal metabolite abundances.2026PubMed
42841906Targeted genome recovery of under-sequenced microbes from the Sequence Read Archive STAT.2026PubMed

Data dates

The date of each source this release read.

Our copy of PubMed
2026-11-06
NLM's journal list
2026-11-01

Sources 2

  • NLM's journal listNLM's terms
  • PubMedNLM's terms
Each source's terms
  • NLM's journal listNLM's
  • PubMedNLM's terms

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The record and each of its lists are JSON, twenty rows a page. No key.

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