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Paper · 36714980

Efficient plasmid transfer via natural competence in a microbial co-culture.

Cheng YY and 7 others. Mol Syst Biol, 2023. Cited by 15 papers, by iCite.

11 sourcespapers-2026-11-12-0.1.0

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ConductScience Library. Efficient plasmid transfer via natural competence in a microbial co-culture. Papers, record 36714980. Release papers-2026-11-12-0.1.0, 12 Nov 2026. https://conductscience.org/library/papers/36714980

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Paper

PubMed's record of the paper, with iCite's citation figures. No abstract is shown.

Title
Efficient plasmid transfer via natural competence in a microbial co-culture.
PubMed
Journal
Mol Syst Biol
PubMed
Year
2023
PubMed
Publication types
Journal Article, Research Support, N.I.H., Extramural, Research Support, U.S. Gov't, Non-P.H.S.
PubMed
Citations, by iCite
15
iCite
Relative citation ratio, by iCite
1.93
iCite
Revised in PubMed
2023-03-13
PubMed

Authors8

The authors in the order PubMed's record lists them, with the ORCID iDs it states.

OrderAuthorForenameKindORCID iD
1Cheng YYYu-Yuhttps://orcid.org/0000-0002-9173-7344
2Zhou ZZhichao
3Papadopoulos JMJames M
4Zuke JDJason D
5Falbel TGTanya G
6Anantharaman KKarthik
7Burton BMBriana Mhttps://orcid.org/0000-0002-6444-8213
8Venturelli OSOphelia Shttps://orcid.org/0000-0003-2200-1963

Source PubMed

Topics5

NLM's MeSH indexing of the paper, its major topics first.

MeSH termMajor
DNAMajor topic
Anti-Bacterial AgentsMajor topic
Coculture Techniques
Plasmids
Gene Transfer, Horizontal

Source PubMed

Grants2

Each grant PubMed's record writes, matched to the NIH project NIH's grant and paper links name for this paper, and each of those links the record does not write.

Grant, as the record writes itAgencyCountryNIH projectStated bySource
R35GM124774HHS ¦ NIH ¦ National Institute of General Medical Sciences (NIGMS)R35GM124774PubMed and NIHNIH RePORTER
T32 GM007215NIGMS NIH HHSUnited StatesT32GM007215PubMed and NIHNIH RePORTER

Trials0

The trials whose ClinicalTrials.gov record lists the paper, and the trial numbers the paper's PubMed record names.

None in this release.

Comments and corrections0

PubMed's comments and corrections, NLM's own indexing: retractions first, then expressions of concern, errata and updates, and comments last.

None in this release.

References60

The papers the reference list in PubMed's record names, those in our copy of PubMed, in the list's order.

OrderPMIDTitleJournalYearIn PapersSource
121,255,377Simple, fast and high-efficiency transformation system for directed evolution of cellulase in Bacillus subtilis.Microb Biotechnol2011https://conductscience.org/library/papers/21255377PubMed
229,858,957Extracellular DNA in natural environments: features, relevance and applications.Appl Microbiol Biotechnol2018https://conductscience.org/library/papers/29858957PubMed
323,836,866Plasmid-encoded ComI inhibits competence in the ancestral 3610 strain of Bacillus subtilis.J Bacteriol2013https://conductscience.org/library/papers/23836866PubMed
410,099,463The expression of recombinant genes from bacteriophage lambda strong promoters triggers the SOS response in Escherichia coli.Biotechnol Bioeng1998https://conductscience.org/library/papers/10099463PubMed
527,572,835Antibiotics as a selective driver for conjugation dynamics.Nat Microbiol2016https://conductscience.org/library/papers/27572835PubMed
626,412,136Adaptive Horizontal Gene Transfers between Multiple Cheese-Associated Fungi.Curr Biol2015https://conductscience.org/library/papers/26412136PubMed
734,091,124Biotechnology for secure biocontainment designs in an emerging bioeconomy.Curr Opin Biotechnol2021https://conductscience.org/library/papers/34091124PubMed
86,194,148Evidence for an active role of donor cells in natural transformation of Pseudomonas stutzeri.J Bacteriol1983https://conductscience.org/library/papers/6194148PubMed
924,509,783Bacterial transformation: distribution, shared mechanisms and divergent control.Nat Rev Microbiol2014https://conductscience.org/library/papers/24509783PubMed
1022,294,679Natural competence is a major mechanism for horizontal DNA transfer in the oral pathogen Porphyromonas gingivalis.mBio2012https://conductscience.org/library/papers/22294679PubMed

1 to 10 of 60

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Cited by13

The papers in our copy of PubMed whose reference list names this one, newest first. iCite, which reads more sources, counts 15 citations.

PMIDTitleJournalYearIn PapersSource
42,791,968Evaluation of qPCR for Quantifying Escherichia coli and Tetracycline Resistance Genes in Pig Caecal and Pork Skin Samples: A Comparison with Culture-Based Method.Antibiotics (Basel)2026https://conductscience.org/library/papers/42791968PubMed
42,143,575Bile acid metabolism dysregulation following Helicobacter pylori eradication promotes plasmid-mediated antimicrobial resistance in the gut microbiome.ISME J2026https://conductscience.org/library/papers/42143575PubMed
41,774,204The Role of the Environmental Microbiome in Modulating the Spread of Antimicrobial Resistance.Curr Microbiol2026https://conductscience.org/library/papers/41774204PubMed
40,802,478Naturally competent bacteria and their genetic parasites-a battle for control over horizontal gene transfer?FEMS Microbiol Rev2025https://conductscience.org/library/papers/40802478PubMed
40,275,408Unveiling plasmid diversity and functionality in pristine groundwater.Environ Microbiome2025https://conductscience.org/library/papers/40275408PubMed
39,338,594An Overview of the Recent Advances in Antimicrobial Resistance.Microorganisms2024https://conductscience.org/library/papers/39338594PubMed
38,440,091SCCmec transformation requires living donor cells in mixed biofilms.Biofilm2024https://conductscience.org/library/papers/38440091PubMed
38,352,175Efficient natural plasmid transformation of Vibrio natriegens enables zero-capital molecular biology.PNAS Nexus2024https://conductscience.org/library/papers/38352175PubMed
38,233,503Massively parallel single-cell sequencing of diverse microbial populations.Nat Methods2024https://conductscience.org/library/papers/38233503PubMed
38,086,386Engineering E. coli strains using antibiotic-resistance-gene-free plasmids.Cell Rep Methods2023https://conductscience.org/library/papers/38086386PubMed

1 to 10 of 13

See all 13 cited by

Genes0

The genes the Gene search release ties to the paper: Swiss-Prot's references first, then PubTator's text mining.

None in this release.

Drugs0

The drugs whose trials, in the Pipelines release, list the paper.

None in this release.

Data0

The data bank entries PubMed's record names. Trial numbers are under Trials.

None in this release.

Data dates

The date of each source this release read.

PubMed
2026-11-06
PubMed
iCite
2026-11-05
iCite
PMC's ID file
2026-11-05
PMC's ID file
NIH RePORTER's grant and paper links
2026-11-01
NIH RePORTER's grant and paper links
Trials
2026-11-12
Gene search
2026-11-11
Pipelines
2026-09-18

Sources 11

  • ChEMBL, through Open TargetsCC BY-SA 3.0
  • ClinicalTrials.govNo license stated
  • HGNCCC0
  • iCiteCC BY 4.0
  • NCBI GenePublic domain (US government)
  • NIH RePORTER's grant and paper linksPublic domain
  • Open TargetsCC0 1.0
  • PMC's ID filePublic domain (US government)
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0
Each source's terms
  • ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • ClinicalTrials.govnone stated
  • HGNCCC0: https://www.genenames.org/about/license/
  • iCiteCC BY 4.0
  • NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • NIH RePORTER's grant and paper linksPublic domain (NIH RePORTER)
  • Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • PMC's ID fileNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license

ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.

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