Paper · 37683045
Replication cycle timing determines phage sensitivity to a cytidine deaminase toxin/antitoxin bacterial defense system.
Hsueh BY and 4 others. PLoS Pathog, 2023. Cited by 13 papers, by iCite.
11 sourcespapers-2026-11-12-0.1.0
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ConductScience Library. Replication cycle timing determines phage sensitivity to a cytidine deaminase toxin/antitoxin bacterial defense system. Papers, record 37683045. Release papers-2026-11-12-0.1.0, 12 Nov 2026. https://conductscience.org/library/papers/37683045
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Paper
PubMed's record of the paper, with iCite's citation figures. No abstract is shown.
- Title
- Replication cycle timing determines phage sensitivity to a cytidine deaminase toxin/antitoxin bacterial defense system.
- PubMed
Topics6
NLM's MeSH indexing of the paper, its major topics first.
| MeSH term | Major |
|---|---|
| Antitoxins | Major topic |
| Bacteriophages | Major topic |
| Cytidine Deaminase | |
| Bacteria | |
| Nucleotides | |
| RNA |
Source PubMed
Grants3
Each grant PubMed's record writes, matched to the NIH project NIH's grant and paper links name for this paper, and each of those links the record does not write.
| Grant, as the record writes it | Agency | Country | NIH project | Stated by | Source |
|---|---|---|---|---|---|
| R01 AI158433 | NIAID NIH HHS | United States | R01AI158433 | PubMed and NIH | NIH RePORTER |
| R01 NR008052 | NINR NIH HHS | United States | R01NR008052 | PubMed | NIH RePORTER |
| R35 GM139537 | NIGMS NIH HHS | United States | R35GM139537 | PubMed and NIH | NIH RePORTER |
Trials0
The trials whose ClinicalTrials.gov record lists the paper, and the trial numbers the paper's PubMed record names.
None in this release.
Comments and corrections1
PubMed's comments and corrections, NLM's own indexing: retractions first, then expressions of concern, errata and updates, and comments last.
| Kind | PMID | Title | In Papers |
|---|---|---|---|
| Update of | 36,798,279 |
Source PubMed
References54
The papers the reference list in PubMed's record names, those in our copy of PubMed, in the list's order.
| Order | PMID | Title | Journal | Year | In Papers | Source |
|---|---|---|---|---|---|---|
| 1 | 18,521,572 | Effects of luxCDABEG induction in Vibrio fischeri: enhancement of symbiotic colonization and conditional attenuation of growth in culture. | Arch Microbiol | 2008 | https://conductscience.org/library/papers/18521572 | PubMed |
| 2 | 27,497,318 | Evolved Populations of Shigella flexneri Phage Sf6 Acquire Large Deletions, Altered Genomic Architecture, and Faster Life Cycles. | Genome Biol Evol | 2016 | https://conductscience.org/library/papers/27497318 | PubMed |
| 3 | 32,937,646 | Prokaryotic viperins produce diverse antiviral molecules. | Nature | 2021 | https://conductscience.org/library/papers/32937646 | PubMed |
| 4 | 15,718,296 | Toxin-antitoxin loci are highly abundant in free-living but lost from host-associated prokaryotes. | Nucleic Acids Res | 2005 | https://conductscience.org/library/papers/15718296 | PubMed |
| 5 | 23,093,930 | Determining host metabolic limitations on viral replication via integrated modeling and experimental perturbation. | PLoS Comput Biol | 2012 | https://conductscience.org/library/papers/23093930 | PubMed |
| 6 | 31,533,127 | Cyclic GMP-AMP signalling protects bacteria against viral infection. | Nature | 2019 | https://conductscience.org/library/papers/31533127 | PubMed |
| 7 | 13,888,713 | Host specificity of DNA produced by Escherichia coli. II. Control over acceptance of DNA from infecting phage lambda. | J Mol Biol | 1962 | https://conductscience.org/library/papers/13888713 | PubMed |
| 8 | 33,838,104 | Shutoff of host transcription triggers a toxin-antitoxin system to cleave phage RNA and abort infection. | Mol Cell | 2021 | https://conductscience.org/library/papers/33838104 | PubMed |
| 9 | 8,411,153 | Plasmid addiction genes of bacteriophage P1: doc, which causes cell death on curing of prophage, and phd, which prevents host death when prophage is retained. | J Mol Biol | 1993 | https://conductscience.org/library/papers/8411153 | PubMed |
| 10 | 35,725,776 | The DarTG toxin-antitoxin system provides phage defence by ADP-ribosylating viral DNA. | Nat Microbiol | 2022 | https://conductscience.org/library/papers/35725776 | PubMed |
1 to 10 of 54
See all 54 referencesCited by12
The papers in our copy of PubMed whose reference list names this one, newest first. iCite, which reads more sources, counts 13 citations.
| PMID | Title | Journal | Year | In Papers | Source |
|---|---|---|---|---|---|
| 41,285,378 | Battle beyond membrane: flagella as a conduit for phage DNA entry and a trigger for bacterial defense in Yersinia enterocolitica. | Nucleic Acids Res | 2025 | https://conductscience.org/library/papers/41285378 | PubMed |
| 41,279,190 | Targeting multidrug-resistant bacteria with genetic-information-free protein-only phages. | bioRxiv | 2025 | https://conductscience.org/library/papers/41279190 | PubMed |
| 40,904,118 | Defence systems encoded by core genomic islands of seventh pandemic Vibrio cholerae. | Philos Trans R Soc Lond B Biol Sci | 2025 | https://conductscience.org/library/papers/40904118 | PubMed |
| 40,730,656 | Manipulation of the nucleotide pool in human, bacterial and plant immunity. | Nat Rev Immunol | 2026 | https://conductscience.org/library/papers/40730656 | PubMed |
| 40,695,854 | Bioinformatic exploration reveals features of tenpIN family of type III toxin-antitoxin systems in bacteria and viruses. | Sci Rep | 2025 | https://conductscience.org/library/papers/40695854 | PubMed |
| 40,568,932 | An archaeal chronic virus escapes the immunity of prokaryotic Argonaute. | Nucleic Acids Res | 2025 | https://conductscience.org/library/papers/40568932 | PubMed |
| 40,169,592 | A toxin-antitoxin system provides phage defense via DNA damage and repair. | Nat Commun | 2025 | https://conductscience.org/library/papers/40169592 | PubMed |
| 40,052,347 | Insight into the environmental cues modulating the expression of bacterial toxin-antitoxin systems. | FEMS Microbiol Rev | 2025 | https://conductscience.org/library/papers/40052347 | PubMed |
| 39,777,537 | Molecular and genetic analysis of methicillin-resistant Staphylococcus aureus (MRSA) in a tertiary care hospital in Saudi Arabia. | Naunyn Schmiedebergs Arch Pharmacol | 2025 | https://conductscience.org/library/papers/39777537 | PubMed |
| 39,445,801 | Conformational change as a mechanism for toxin activation in bacterial toxin-antitoxin systems. | J Virol | 2024 | https://conductscience.org/library/papers/39445801 | PubMed |
1 to 10 of 12
See all 12 cited byGenes3
The genes the Gene search release ties to the paper: Swiss-Prot's references first, then PubTator's text mining.
| Gene | NCBI Gene ID | Linked by | In Genes | Source |
|---|---|---|---|---|
| AVSD1 | 7,446 | PubTator's text mining | https://conductscience.org/library/genes/7446 | NCBI Gene |
| CDA | 978 | PubTator's text mining | https://conductscience.org/library/genes/978 | NCBI Gene |
| DCTD | 1,635 | PubTator's text mining | https://conductscience.org/library/genes/1635 | NCBI Gene |
Drugs0
The drugs whose trials, in the Pipelines release, list the paper.
None in this release.
Data1
The data bank entries PubMed's record names. Trial numbers are under Trials.
| Data bank | Accession |
|---|---|
| figshare | 10.6084/m9.figshare.22028480.v1 |
Source figshare
Data dates
The date of each source this release read.
- Trials
- 2026-11-12
- Gene search
- 2026-11-11
- Pipelines
- 2026-09-18
Sources 11
- ChEMBL, through Open TargetsCC BY-SA 3.0
- ClinicalTrials.govNo license stated
- HGNCCC0
- iCiteCC BY 4.0
- NCBI GenePublic domain (US government)
- NIH RePORTER's grant and paper linksPublic domain
- Open TargetsCC0 1.0
- PMC's ID filePublic domain (US government)
- PubMedNLM's terms
- PubTator 3Public domain
- UniProtCC BY 4.0
Each source's terms
- ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
- ClinicalTrials.govnone stated
- HGNCCC0: https://www.genenames.org/about/license/
- iCiteCC BY 4.0
- NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
- NIH RePORTER's grant and paper linksPublic domain (NIH RePORTER)
- Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
- PMC's ID fileNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
- PubMedNLM's terms
- PubTator 3Public domain
- UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license
ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.
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