ConductScience.org, home
Papers
API referenceFor AI assistants

Paper3897201

Metabolic pathway for the utilization of L-arginine, L-ornithine, agmatine, and putrescine as nitrogen sources in Escherichia coli K-12.

Shaibe E and 2 others. J Bacteriol, 1985. Cited by 48 papers, by iCite.

11 sourcespapers-2026-11-12-0.1.0

Download JSON
Cite this record

ConductScience Library. Metabolic pathway for the utilization of L-arginine, L-ornithine, agmatine, and putrescine as nitrogen sources in Escherichia coli K-12. Papers, record 3897201. Release papers-2026-11-12-0.1.0, 12 Nov 2026. https://conductscience.org/library/papers/3897201

Paper

PubMed's record of the paper, with iCite's citation figures. No abstract is shown.

Title
Metabolic pathway for the utilization of L-arginine, L-ornithine, agmatine, and putrescine as nitrogen sources in Escherichia coli K-12.
PubMed
Journal
J Bacteriol
PubMed
Year
1985
PubMed
Publication types
Journal Article, Research Support, U.S. Gov't, Non-P.H.S.
PubMed
Citations, by iCite
48
iCite
Relative citation ratio, by iCite
1.54
iCite
Revised in PubMed
2021-05-26
PubMed

Authors3

The authors in the order PubMed's record lists them, with the ORCID iDs it states.

OrderAuthorForenameKindORCID iD
1Shaibe EE
2Metzer EE
3Halpern YSY S

Source PubMed

Topics11

NLM's MeSH indexing of the paper, its major topics first.

MeSH termMajor
AgmatineMajor topic
ArginineMajor topic
Escherichia coliMajor topic
GuanidinesMajor topic
NitrogenMajor topic
OrnithineMajor topic
PutrescineMajor topic
Genotype
Kinetics
Mutation
Species Specificity

Source PubMed

References25

The papers the reference list in PubMed's record names, those in our copy of PubMed, in the list's order.

OrderPMIDTitleJournalYearIn PapersSource
15,936,244[Induction and specificity of enzymes of the new catabolic arginine pathway].Biochim Biophys Acta1966https://conductscience.org/library/papers/5936244PubMed
213,851,300Selecting bacterial mutants by the penicillin method.Science1960https://conductscience.org/library/papers/13851300PubMed
34,891,156Formation of 1,4-diaminobutane and of spermidine by an ornithine auxotroph of Escherichia coli grown on limiting ornithine or arginine.J Biol Chem1969https://conductscience.org/library/papers/4891156PubMed
44,900,508Putrescine biosynthesis in Escherichia coli. Regulation through pathway selection.J Biol Chem1969https://conductscience.org/library/papers/4900508PubMed
54,908,780Isolation and characterization of a mutant of Escherichia coli blocked in the synthesis of putrescine.J Bacteriol1970https://conductscience.org/library/papers/4908780PubMed
64,564,714Mapping of genes involved in the synthesis of spermidine in Escherichia coli.Mol Gen Genet1972https://conductscience.org/library/papers/4564714PubMed
74,579,440Arginine gene clusters in the Proteus-Providence group.J Gen Microbiol1973https://conductscience.org/library/papers/4579440PubMed
84,580,052The induction of arginase in Saccharomyces cerevisiae.J Biol Chem1973https://conductscience.org/library/papers/4580052PubMed
94,590,473Genetic analysis of the gamma-aminobutyrate utilization pathway in Escherichia coli K-12.J Bacteriol1974https://conductscience.org/library/papers/4590473PubMed
104,599,318Inducible and repressible acetylornithine delta-transaminase in Escherichia coli: different proteins.Arch Biochem Biophys1974https://conductscience.org/library/papers/4599318PubMed
11237,915Intermediates and enzymes between alpha-ketoarginine and gamma-guanidinobutyrate in the L-arginine catabolic pathway of Pseudomonas putida.J Biol Chem1975https://conductscience.org/library/papers/237915PubMed
1214,104Biochemical parameters of glutamine synthetase from Klebsiella aerogenes.J Bacteriol1977https://conductscience.org/library/papers/14104PubMed
1318,438Urease of Klebsiella aerogenes: control of its synthesis by glutamine synthetase.J Bacteriol1977https://conductscience.org/library/papers/18438PubMed
1424,037Regulation of gamma-aminobutyric acid degradation in Escherichia coli by nitrogen metabolism enzymes.J Bacteriol1978https://conductscience.org/library/papers/24037PubMed
15342,501Utilization of arginine by Klebsiella aerogenes.J Bacteriol1978https://conductscience.org/library/papers/342501PubMed
1628,310Specificity and regulation of gamma-aminobutyrate transport in Escherichia coli.J Bacteriol1978https://conductscience.org/library/papers/28310PubMed
17104,957Carbon and nitrogen repression of arginine catabolic enzymes in Bacillus subtilis.J Bacteriol1979https://conductscience.org/library/papers/104957PubMed
18374,339Isolation and properties of Escherichia coli K-12 mutants impaired in the utilization of gamma-aminobutyrate.J Bacteriol1979https://conductscience.org/library/papers/374339PubMed
19386,920Arginine catabolism by microorganisms.Annu Rev Microbiol1979https://conductscience.org/library/papers/386920PubMed
206,768,836Catabolism of L-arginine by Pseudomonas aeruginosa.J Gen Microbiol1980https://conductscience.org/library/papers/6768836PubMed

See all 25 references

Cited by28

The papers in our copy of PubMed whose reference list names this one, newest first. iCite, which reads more sources, counts 48 citations.

PMIDTitleJournalYearIn PapersSource
41,003,010The Impact of Gut Microbial Metabolomics on Type 2 Diabetes Development in People Living with HIV.Metabolites2025https://conductscience.org/library/papers/41003010PubMed
40,234,982Research progress on the microbial metabolism and transport of polyamines and their roles in animal gut homeostasis.J Anim Sci Biotechnol2025https://conductscience.org/library/papers/40234982PubMed
38,137,351Exploring the Therapeutic Potential of Gamma-Aminobutyric Acid in Stress and Depressive Disorders through the Gut-Brain Axis.Biomedicines2023https://conductscience.org/library/papers/38137351PubMed
37,189,741N-Carbamoylputrescine Amidohydrolase of Bacteroides thetaiotaomicron, a Dominant Species of the Human Gut Microbiota.Biomedicines2023https://conductscience.org/library/papers/37189741PubMed
35,997,332Polyamine and Ethanolamine Metabolism in Bacteria as an Important Component of Nitrogen Assimilation for Survival and Pathogenicity.Med Sci (Basel)2022https://conductscience.org/library/papers/35997332PubMed
34,910,273Improvement of putrescine production through the arginine decarboxylase pathway in Escherichia coli K-12.AMB Express2021https://conductscience.org/library/papers/34910273PubMed
34,439,822Novel Glutamate-Putrescine Ligase Activity in Haloferax mediterranei: A New Function for glnA-2 Gene.Biomolecules2021https://conductscience.org/library/papers/34439822PubMed
34,072,136Resolving the Contradictory Functions of Lysine Decarboxylase and Butyrate in Periodontal and Intestinal Diseases.J Clin Med2021https://conductscience.org/library/papers/34072136PubMed
33,936,013GABA Production by Human Intestinal Bacteroides spp.: Prevalence, Regulation, and Role in Acid Stress Tolerance.Front Microbiol2021https://conductscience.org/library/papers/33936013PubMed
32,652,929Gut microbiota maturation during early human life induces enterocyte proliferation via microbial metabolites.BMC Microbiol2020https://conductscience.org/library/papers/32652929PubMed
31,501,251Identification of Host Adaptation Genes in Extraintestinal Pathogenic Escherichia coli during Infection in Different Hosts.Infect Immun2019https://conductscience.org/library/papers/31501251PubMed
28,487,688Gamma-Glutamylpolyamine Synthetase GlnA3 Is Involved in the First Step of Polyamine Degradation Pathway in Streptomyces coelicolor M145.Front Microbiol2017https://conductscience.org/library/papers/28487688PubMed
28,338,677Integrated metabolism in sponge-microbe symbiosis revealed by genome-centered metatranscriptomics.ISME J2017https://conductscience.org/library/papers/28338677PubMed
26,368,558Mycobacterium tuberculosis Is a Natural Ornithine Aminotransferase (rocD) Mutant and Depends on Rv2323c for Growth on Arginine.PLoS One2015https://conductscience.org/library/papers/26368558PubMed
26,323,613The many roles of glutamate in metabolism.J Ind Microbiol Biotechnol2016https://conductscience.org/library/papers/26323613PubMed
22,636,776Pathway and enzyme redundancy in putrescine catabolism in Escherichia coli.J Bacteriol2012https://conductscience.org/library/papers/22636776PubMed
16,407,306AtGAT1, a high affinity transporter for gamma-aminobutyric acid in Arabidopsis thaliana.J Biol Chem2006https://conductscience.org/library/papers/16407306PubMed
12,617,754Molecular cloning and characterization of Escherichia coli K12 ygjG gene.BMC Microbiol2003https://conductscience.org/library/papers/12617754PubMed
12,446,648The Escherichia coli gabDTPC operon: specific gamma-aminobutyrate catabolism and nonspecific induction.J Bacteriol2002https://conductscience.org/library/papers/12446648PubMed
12,081,945Functional analysis and regulation of the divergent spuABCDEFGH-spuI operons for polyamine uptake and utilization in Pseudomonas aeruginosa PAO1.J Bacteriol2002https://conductscience.org/library/papers/12081945PubMed

See all 28 cited by

Data dates

The date of each source this release read.

PubMed
2026-11-06
PubMed
iCite
2026-11-05
iCite
PMC's ID file
2026-11-05
PMC's ID file
NIH RePORTER's grant and paper links
2026-11-01
NIH RePORTER's grant and paper links
Trials
2026-11-12
Gene search
2026-11-11
Pipelines
2026-09-18

None in this release

  • Grants
  • Trials
  • Comments and corrections
  • Genes
  • Drugs
  • Data

Sources 11

  • ChEMBL, through Open TargetsCC BY-SA 3.0
  • ClinicalTrials.govNo license stated
  • HGNCCC0
  • iCiteCC BY 4.0
  • NCBI GenePublic domain (US government)
  • NIH RePORTER's grant and paper linksPublic domain
  • Open TargetsCC0 1.0
  • PMC's ID filePublic domain (US government)
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0
Each source's terms
  • ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • ClinicalTrials.govnone stated
  • HGNCCC0: https://www.genenames.org/about/license/
  • iCiteCC BY 4.0
  • NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • NIH RePORTER's grant and paper linksPublic domain (NIH RePORTER)
  • Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • PMC's ID fileNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license

ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.

For software

Read this paper from software.

The record and each of its lists are JSON, twenty rows a page. No key.

GET https://conductscience.org/api/papers/v1/3897201

GET https://conductscience.org/api/papers/v1/3897201/references?page=2

API referenceFor AI assistants