Paper · 41279409

Adapting CRISPR-associated transposons for rapid and high-throughput reverse genetics.

Basta DW and 5 others. bioRxiv, 2025. Cited by 0 papers, by iCite.

11 sourcespapers-2026-11-12-0.1.0

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ConductScience Library. Adapting CRISPR-associated transposons for rapid and high-throughput reverse genetics. Papers, record 41279409. Release papers-2026-11-12-0.1.0, 12 Nov 2026. https://conductscience.org/library/papers/41279409

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Paper

PubMed's record of the paper, with iCite's citation figures. No abstract is shown.

Title: Adapting CRISPR-associated transposons for rapid and high-throughput reverse genetics.; PubMed
Journal: bioRxiv; PubMed
Year: 2025; PubMed
Publication types: Journal Article, Preprint; PubMed
PubMed: https://pubmed.ncbi.nlm.nih.gov/41279409/; PubMed
DOI: https://doi.org/10.1101/2025.10.31.685825; PubMed
PMC: https://pmc.ncbi.nlm.nih.gov/articles/PMC12636600/; PubMed
The journal: https://conductscience.org/library/journal-index/101680187; PubMed
Citations, by iCite: 0; iCite
Revised in PubMed: 2026-09-18; PubMed

Authors6

The authors in the order PubMed's record lists them, with the ORCID iDs it states.

Order	Author	Forename	ORCID iD
1	Basta DW	David W	https://orcid.org/0000-0003-4176-6566
2	Zingl FG	Franz G
3	Yang Y	Yiyan	https://orcid.org/0000-0001-9508-7396
4	Nguyen KT	Kaylee T	https://orcid.org/0009-0004-7456-2556
5	Liu YY	Yang-Yu	https://orcid.org/0000-0003-2728-4907
6	Waldor MK	Matthew K	https://orcid.org/0000-0003-1843-7000

Source PubMed

Topics0

NLM's MeSH indexing of the paper, its major topics first.

None in this release.

Grants2

Each grant PubMed's record writes, matched to the NIH project NIH's grant and paper links name for this paper, and each of those links the record does not write.

Grant, as the record writes it	Agency	Country	NIH project	Stated by	Source
R01 AI042347	NIAID NIH HHS	United States	R01AI042347	PubMed and NIH	NIH RePORTER
T32 AI007061	NIAID NIH HHS	United States	T32AI007061	PubMed and NIH	NIH RePORTER

Trials0

The trials whose ClinicalTrials.gov record lists the paper, and the trial numbers the paper's PubMed record names.

None in this release.

Comments and corrections0

PubMed's comments and corrections, NLM's own indexing: retractions first, then expressions of concern, errata and updates, and comments last.

None in this release.

References50

The papers the reference list in PubMed's record names, those in our copy of PubMed, in the list's order.

Order	PMID	Title	Journal	Year	In Papers	Source
1	36,304,290	ApE, A Plasmid Editor: A Freely Available DNA Manipulation and Visualization Program.	Front Bioinform	2022	https://conductscience.org/library/papers/36304290	PubMed
2	39,631,148	The promise of CRISPR-associated transposons for bacterial functional genomics.	Curr Opin Microbiol	2025	https://conductscience.org/library/papers/39631148	PubMed
3	28,811,374	Recruitment of CRISPR-Cas systems by Tn7-like transposons.	Proc Natl Acad Sci U S A	2017	https://conductscience.org/library/papers/28811374	PubMed
4	33,271,061	Guide RNA Categorization Enables Target Site Choice in Tn7-CRISPR-Cas Transposons.	Cell	2020	https://conductscience.org/library/papers/33271061	PubMed
5	36,384,163	Functional characterization of diverse type I-F CRISPR-associated transposons.	Nucleic Acids Res	2022	https://conductscience.org/library/papers/36384163	PubMed
6	20,659,289	H-NS-mediated repression of CRISPR-based immunity in Escherichia coli K12 can be relieved by the transcription activator LeuO.	Mol Microbiol	2010	https://conductscience.org/library/papers/20659289	PubMed
7	35,051,352	Evolutionary and mechanistic diversity of Type I-F CRISPR-associated transposons.	Mol Cell	2022	https://conductscience.org/library/papers/35051352	PubMed
8	32,994,326	Gene Dispensability in Escherichia coli Grown in Thirty Different Carbon Environments.	mBio	2020	https://conductscience.org/library/papers/32994326	PubMed
9	27,578,758	The Nucleoid Binding Protein H-NS Biases Genome-Wide Transposon Insertion Landscapes.	mBio	2016	https://conductscience.org/library/papers/27578758	PubMed
10	34,478,496	Orthogonal CRISPR-associated transposases for parallel and multiplexed chromosomal integration.	Nucleic Acids Res	2021	https://conductscience.org/library/papers/34478496	PubMed

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Cited by0

The papers in our copy of PubMed whose reference list names this one, newest first. iCite, which reads more sources, counts 0 citations.

None in this release.

Genes0

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None in this release.

Drugs0

The drugs whose trials, in the Pipelines release, list the paper.

None in this release.

Data0

The data bank entries PubMed's record names. Trial numbers are under Trials.

None in this release.

Data dates

The date of each source this release read.

PubMed: 2026-11-06; PubMed
iCite: 2026-11-05; iCite
PMC's ID file: 2026-11-05; PMC's ID file
NIH RePORTER's grant and paper links: 2026-11-01; NIH RePORTER's grant and paper links
Trials: 2026-11-12
Gene search: 2026-11-11
Pipelines: 2026-09-18

Sources 11

ChEMBL, through Open TargetsCC BY-SA 3.0
ClinicalTrials.govNo license stated
HGNCCC0
iCiteCC BY 4.0
NCBI GenePublic domain (US government)
NIH RePORTER's grant and paper linksPublic domain
Open TargetsCC0 1.0
PMC's ID filePublic domain (US government)
PubMedNLM's terms
PubTator 3Public domain
UniProtCC BY 4.0

Each source's terms

ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
ClinicalTrials.govnone stated
HGNCCC0: https://www.genenames.org/about/license/
iCiteCC BY 4.0
NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
NIH RePORTER's grant and paper linksPublic domain (NIH RePORTER)
Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
PMC's ID fileNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
PubMedNLM's terms
PubTator 3Public domain
UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license

ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.

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