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Paper · 42845282

Pangenome discovery and characterization of human protein-coding duplicated genes.

Ren L and 14 others. bioRxiv, 2026.

11 sourcespapers-2026-11-12-0.1.0

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ConductScience Library. Pangenome discovery and characterization of human protein-coding duplicated genes. Papers, record 42845282. Release papers-2026-11-12-0.1.0, 12 Nov 2026. https://conductscience.org/library/papers/42845282

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Paper

PubMed's record of the paper, with iCite's citation figures. No abstract is shown.

Title
Pangenome discovery and characterization of human protein-coding duplicated genes.
Journal
bioRxiv
Year
2026
Publication types
Journal Article, Preprint
Revised in PubMed
2026-11-05

Source PubMed

Authors15

The authors in the order PubMed's record lists them, with the ORCID iDs it states.

OrderAuthorForenameKindORCID iD
1Ren LLuyao
2Yoo DDongAhn
3Vlajic KKatarina
4Dishuck PCPhilip Chttps://orcid.org/0000-0003-2223-9787
5Guitart XXavi
6Kwon YYoungjun
7Lin JJiadong
8Munson KMKatherine M
9Hoekzema KKendra
10Human Genome Structural Variation Consortium (HGSVC)Group

1 to 10 of 15Source PubMed

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Topics0

NLM's MeSH indexing of the paper, its major topics first.

None in this release.

Grants12

Each grant PubMed's record writes, matched to the NIH project NIH's grant and paper links name for this paper, and each of those links the record does not write.

Grant, as the record writes itAgencyCountryNIH projectStated bySource
U41 HG010972NHGRI NIH HHSUnited StatesU41HG010972PubMedNIH RePORTER
U01 HG013744NHGRI NIH HHSUnited StatesU01HG013744PubMedNIH RePORTER
K99 GM155552NIGMS NIH HHSUnited StatesK99GM155552PubMedNIH RePORTER
R35 GM150919NIGMS NIH HHSUnited StatesR35GM150919PubMedNIH RePORTER
R01 HG011274NHGRI NIH HHSUnited StatesR01HG011274PubMedNIH RePORTER
U01 HG013755NHGRI NIH HHSUnited StatesU01HG013755PubMedNIH RePORTER
U01 HG010971NHGRI NIH HHSUnited StatesU01HG010971PubMedNIH RePORTER
U01 HG013748NHGRI NIH HHSUnited StatesU01HG013748PubMedNIH RePORTER
U24 HG007497NHGRI NIH HHSUnited StatesU24HG007497PubMedNIH RePORTER
R01 HG002385NHGRI NIH HHSUnited StatesR01HG002385PubMedNIH RePORTER

1 to 10 of 12

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Trials0

The trials whose ClinicalTrials.gov record lists the paper, and the trial numbers the paper's PubMed record names.

None in this release.

Comments and corrections0

PubMed's comments and corrections, NLM's own indexing: retractions first, then expressions of concern, errata and updates, and comments last.

None in this release.

References82

The papers the reference list in PubMed's record names, those in our copy of PubMed, in the list's order.

OrderPMIDTitleJournalYearIn PapersSource
123,064,749Evolutionary dynamism of the primate LRRC37 gene family.Genome Res2013https://conductscience.org/library/papers/23064749PubMed
231,848,477Overcoming challenges and dogmas to understand the functions of pseudogenes.Nat Rev Genet2020https://conductscience.org/library/papers/31848477PubMed
327,268,795The Ensembl Variant Effect Predictor.Genome Biol2016https://conductscience.org/library/papers/27268795PubMed
438,509,328SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms.Nat Methods2024https://conductscience.org/library/papers/38509328PubMed
540,770,095Whole-genome sequencing of 490,640 UK Biobank participants.Nature2025https://conductscience.org/library/papers/40770095PubMed
639,107,043Independent expansion, selection, and hypervariability of the TBC1D3 gene family in humans.Genome Res2024https://conductscience.org/library/papers/39107043PubMed
737,165,237Increased mutation and gene conversion within human segmental duplications.Nature2023https://conductscience.org/library/papers/37165237PubMed
822,559,943Evolution of human-specific neural SRGAP2 genes by incomplete segmental duplication.Cell2012https://conductscience.org/library/papers/22559943PubMed
920,003,500BLAST+: architecture and applications.BMC Bioinformatics2009https://conductscience.org/library/papers/20003500PubMed
1032,421,357Progress, Challenges, and Surprises in Annotating the Human Genome.Annu Rev Genomics Hum Genet2020https://conductscience.org/library/papers/32421357PubMed

1 to 10 of 82

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Cited by0

The papers in our copy of PubMed whose reference list names this one, newest first.

None in this release.

Genes0

The genes the Gene search release ties to the paper: Swiss-Prot's references first, then PubTator's text mining.

None in this release.

Drugs0

The drugs whose trials, in the Pipelines release, list the paper.

None in this release.

Data0

The data bank entries PubMed's record names. Trial numbers are under Trials.

None in this release.

Data dates

The date of each source this release read.

PubMed
2026-11-06
PubMed
iCite
2026-11-05
iCite
PMC's ID file
2026-11-05
PMC's ID file
NIH RePORTER's grant and paper links
2026-11-01
NIH RePORTER's grant and paper links
Trials
2026-11-12
Gene search
2026-11-11
Pipelines
2026-09-18

Sources 11

  • ChEMBL, through Open TargetsCC BY-SA 3.0
  • ClinicalTrials.govNo license stated
  • HGNCCC0
  • iCiteCC BY 4.0
  • NCBI GenePublic domain (US government)
  • NIH RePORTER's grant and paper linksPublic domain
  • Open TargetsCC0 1.0
  • PMC's ID filePublic domain (US government)
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0
Each source's terms
  • ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • ClinicalTrials.govnone stated
  • HGNCCC0: https://www.genenames.org/about/license/
  • iCiteCC BY 4.0
  • NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • NIH RePORTER's grant and paper linksPublic domain (NIH RePORTER)
  • Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • PMC's ID fileNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license

ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.

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