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Gene · 5885

Papers3,897

Newest first. Swiss-Prot's references are curated; PubTator's text mining finds papers that name the gene, not always ones about it.

TitleJournalYearPMIDFound bySource
UniChrom: a universal deep learning architecture for cross-scale chromatin interaction prediction.BMC Genomics202641663926PubTator, text miningPubMed
Ultra-deep duplex sequencing reveals unique features of somatic evolution in the normal tissues of a family with Li-Fraumeni syndrome.bioRxiv202641648398PubTator, text miningPubMed
Single-cell analysis reveals cytotoxic and memory CD8+ T cells associated with prolonged survival in relapsed/refractory leukaemia patients after haplo+cord haematopoietic stem cell transplantation.Clin Transl Med202641640047PubTator, text miningPubMed
Hybrid female sterility due to cohesin protection errors in mouse oocytes.Sci Adv202641637509PubTator, text miningPubMed
Boosting the detection of enhancer-promoter loops via normalization methods for chromatin interaction data.Nat Commun202641633996PubTator, text miningPubMed
Parameter-efficient fine-tuning enables scalable transfer of regulatory sequence models to novel contexts.Genome Biol202641618434PubTator, text miningPubMed
A genetic screen for modifiers of cohesin clustering identifies regulators of genome folding.Sci Adv202641616049PubTator, text miningPubMed
Advances in scCUT&Tag and computational analysis for single-cell gene regulatory element mapping.Brief Bioinform202641609358PubTator, text miningPubMed
Hijacking the helpers: platelet and neutrophil trafficking in AML and therapeutic exploitation.Exp Hematol Oncol202641593686PubTator, text miningPubMed
A novel dual histone mark reader ZCWPW2 regulates meiotic recombination through lactylation and transcriptional regulation in humans and mice.Nucleic Acids Res202641574437PubTator, text miningPubMed
Hybrid deep learning framework for accurate classification of high dimensional genomic data.Sci Rep202641565905PubTator, text miningPubMed
Novel variants in STAG2 and PKD1 associate with multiple congenital malformations and autosomal dominant polycystic kidney disease in a Chinese family: A case report and literature review.Exp Ther Med202641560868PubTator, text miningPubMed
Dissecting the contribution of transposable elements to interphase chromosome structure.Genome Biol202641559820PubTator, text miningPubMed
CLAMP: predicting specific protein-mediated chromatin loops in diverse species with a chromatin accessibility language model.Genome Biol202641555433PubTator, text miningPubMed
Paediatric blastic plasmacytoid dendritic cell neoplasm: a single-centre case series of 18 children and review of the literature.Ann Hematol202641545574PubTator, text miningPubMed
Global Evaluation of Congenital Heart Disease-Associated Non-Coding Variants.Res Sq202641542063PubTator, text miningPubMed
Mixed-model and transcriptome-wide association analyses identify transcription factors and genes associated with colorectal cancer susceptibility.Nat Commun202641540004PubTator, text miningPubMed
Unravelling co-mutational patterns with prognostic implications in NPM1 mutated adult acute myeloid leukemia - a HARMONY study.Leukemia202641535568PubTator, text miningPubMed
Interplay between cohesin and RNA polymerase II in regulating chromatin interactions and gene transcription.Nat Struct Mol Biol202641530636PubTator, text miningPubMed
EpiXFormer: a cross-attention neural network for predicting cell type-specific transcription factor binding sites.Brief Bioinform202641527854PubTator, text miningPubMed

gene-search-2026-11-11-0.2.0

Sources 12

  • ClinicalTrials.gov's posted results, through CTTI's AACTFreely available. Acknowledgement requested
  • ChEMBL, through Open TargetsCC BY-SA 3.0
  • ClinicalTrials.govNo license stated
  • EMBL-EBI's patent proteinsNo added restrictions. Attribution expected
  • GenBank's patent filesNo restrictions from NCBI. Submitters may hold rights
  • HGNCCC0
  • NCBI GenePublic domain (US government)
  • NIH's project files and grant-paper linksPublic domain
  • Open TargetsCC0 1.0
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0
Each source's terms
  • ClinicalTrials.gov's posted results, through CTTI's AACTClinicalTrials.gov data via Aggregate Analysis of ClinicalTrials.gov (AACT), CTTI. CTTI makes its materials freely available and requests acknowledgement. https://aact.ctti-clinicaltrials.org/documentation/299
  • ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • ClinicalTrials.govnone stated
  • EMBL-EBI's patent proteinsEMBL-EBI's patent protein files from the EPO, JPO, KIPO and USPTO. EMBL-EBI: "EMBL-EBI itself places no additional restrictions on the use or redistribution of the data available via its Data Resources and Tools other than those provided by the original data owners" and "EMBL-EBI expects attribution (e.g. in publications, services or products) for the use of any of its Data Resources and Tools." Read on 11 Nov 2026 at https://www.ebi.ac.uk/about/terms-of-use
  • GenBank's patent filesGenBank's patent files. NCBI: "NCBI places no restrictions on the use or distribution of the GenBank data. However, some submitters may claim patent, copyright, or other intellectual property rights in all or a portion of the data they have submitted." Read on 11 Nov 2026 at https://www.ncbi.nlm.nih.gov/genbank/about/
  • HGNCCC0: https://www.genenames.org/about/license/
  • NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • NIH's project files and grant-paper linksPublic domain (NIH RePORTER)
  • Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license

ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.

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