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Paper · 40975871

Protocol for pooled FACS-based CRISPR knockout screening in human iPSC-derived microglia.

Washer SJ and 4 others. STAR Protoc, 2025. Cited by 1 paper, by iCite.

11 sourcespapers-2026-11-12-0.1.0

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ConductScience Library. Protocol for pooled FACS-based CRISPR knockout screening in human iPSC-derived microglia. Papers, record 40975871. Release papers-2026-11-12-0.1.0, 12 Nov 2026. https://conductscience.org/library/papers/40975871

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Paper

PubMed's record of the paper, with iCite's citation figures. No abstract is shown.

Title
Protocol for pooled FACS-based CRISPR knockout screening in human iPSC-derived microglia.
PubMed
Journal
STAR Protoc
PubMed
Year
2025
PubMed
Publication types
Journal Article
PubMed
Citations, by iCite
1
iCite
Revised in PubMed
2026-09-25
PubMed

Authors5

The authors in the order PubMed's record lists them, with the ORCID iDs it states.

OrderAuthorForenameKindORCID iD
1Washer SJSam J
2Navarro-Guerrero EElena
3Cowley SASally A
4Ebner DVDaniel V
5Bassett ARAndrew R

Source PubMed

Topics8

NLM's MeSH indexing of the paper, its major topics first.

MeSH termMajor
Induced Pluripotent Stem CellsMajor topic
MicrogliaMajor topic
CRISPR-Cas SystemsMajor topic
Gene Knockout TechniquesMajor topic
Flow CytometryMajor topic
Humans
Lentivirus
Phagocytosis

Source PubMed

Grants0

Each grant PubMed's record writes, matched to the NIH project NIH's grant and paper links name for this paper, and each of those links the record does not write.

None in this release.

Trials0

The trials whose ClinicalTrials.gov record lists the paper, and the trial numbers the paper's PubMed record names.

None in this release.

Comments and corrections0

PubMed's comments and corrections, NLM's own indexing: retractions first, then expressions of concern, errata and updates, and comments last.

None in this release.

References14

The papers the reference list in PubMed's record names, those in our copy of PubMed, in the list's order.

OrderPMIDTitleJournalYearIn PapersSource
135,379,992New insights into the genetic etiology of Alzheimer's disease and related dementias.Nat Genet2022https://conductscience.org/library/papers/35379992PubMed
241,353,404A next-generation dual guide CRISPR system for genetic interaction library screening.Nat Commun2025https://conductscience.org/library/papers/41353404PubMed
336,376,339Single-cell transcriptomics defines an improved, validated monoculture protocol for differentiation of human iPSC to microglia.Sci Rep2022https://conductscience.org/library/papers/36376339PubMed
429,224,076Next-Generation Sequencing of Genome-Wide CRISPR Screens.Methods Mol Biol2018https://conductscience.org/library/papers/29224076PubMed
527,760,321A CRISPR Dropout Screen Identifies Genetic Vulnerabilities and Therapeutic Targets in Acute Myeloid Leukemia.Cell Rep2016https://conductscience.org/library/papers/27760321PubMed
636,459,969A reference human induced pluripotent stem cell line for large-scale collaborative studies.Cell Stem Cell2022https://conductscience.org/library/papers/36459969PubMed
733,427,296The microglial component of amyotrophic lateral sclerosis.Brain2020https://conductscience.org/library/papers/33427296PubMed
838,401,123Optimized protocol for CRISPR knockout of human iPSC-derived macrophages.STAR Protoc2024https://conductscience.org/library/papers/38401123PubMed
933,589,840Genome-wide meta-analysis, fine-mapping and integrative prioritization implicate new Alzheimer's disease risk genes.Nat Genet2021https://conductscience.org/library/papers/33589840PubMed
1025,075,903Improved vectors and genome-wide libraries for CRISPR screening.Nat Methods2014https://conductscience.org/library/papers/25075903PubMed

Cited by1

The papers in our copy of PubMed whose reference list names this one, newest first. iCite, which reads more sources, counts 1 citation.

PMIDTitleJournalYearIn Papers
41,943,483Tracking tau and cellular responses in human iPSC-microglia: from uptake to seedable secretion, including in extracellular vesicles.Alzheimers Dement2026https://conductscience.org/library/papers/41943483

Source PubMed

Genes0

The genes the Gene search release ties to the paper: Swiss-Prot's references first, then PubTator's text mining.

None in this release.

Drugs0

The drugs whose trials, in the Pipelines release, list the paper.

None in this release.

Data0

The data bank entries PubMed's record names. Trial numbers are under Trials.

None in this release.

Data dates

The date of each source this release read.

PubMed
2026-11-06
PubMed
iCite
2026-11-05
iCite
PMC's ID file
2026-11-05
PMC's ID file
NIH RePORTER's grant and paper links
2026-11-01
NIH RePORTER's grant and paper links
Trials
2026-11-12
Gene search
2026-11-11
Pipelines
2026-09-18

Sources 11

  • ChEMBL, through Open TargetsCC BY-SA 3.0
  • ClinicalTrials.govNo license stated
  • HGNCCC0
  • iCiteCC BY 4.0
  • NCBI GenePublic domain (US government)
  • NIH RePORTER's grant and paper linksPublic domain
  • Open TargetsCC0 1.0
  • PMC's ID filePublic domain (US government)
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0
Each source's terms
  • ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • ClinicalTrials.govnone stated
  • HGNCCC0: https://www.genenames.org/about/license/
  • iCiteCC BY 4.0
  • NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • NIH RePORTER's grant and paper linksPublic domain (NIH RePORTER)
  • Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • PMC's ID fileNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license

ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.

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