Paper · 42755366

Shuttling, swapping, and mixing: the rapid modular evolution of antiviral repertoires in temperate phages and their satellites.

de Sousa JM and 12 others. Nucleic Acids Res, 2026. Cited by 0 papers, by iCite.

11 sourcespapers-2026-11-12-0.1.0

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ConductScience Library. Shuttling, swapping, and mixing: the rapid modular evolution of antiviral repertoires in temperate phages and their satellites. Papers, record 42755366. Release papers-2026-11-12-0.1.0, 12 Nov 2026. https://conductscience.org/library/papers/42755366

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Paper

PubMed's record of the paper, with iCite's citation figures. No abstract is shown.

Title: Shuttling, swapping, and mixing: the rapid modular evolution of antiviral repertoires in temperate phages and their satellites.; PubMed
Journal: Nucleic Acids Res; PubMed
Year: 2026; PubMed
Publication types: Journal Article; PubMed
PubMed: https://pubmed.ncbi.nlm.nih.gov/42755366/; PubMed
DOI: https://doi.org/10.1093/nar/gkag898; PubMed
PMC: https://pmc.ncbi.nlm.nih.gov/articles/PMC13586616/; PubMed
The journal: https://conductscience.org/library/journal-index/0411011; PubMed
Citations, by iCite: 0; iCite
Revised in PubMed: 2026-09-20; PubMed

Authors13

The authors in the order PubMed's record lists them, with the ORCID iDs it states.

Order	Author	Forename	ORCID iD
1	de Sousa JM	Jorge Moura	https://orcid.org/0000-0003-3530-8550
2	Depardieu F	Florence
3	Touchon M	Marie	https://orcid.org/0000-0001-7389-447X
4	Laurenceau R	Raphaël	https://orcid.org/0000-0002-1326-9928
5	Curry K	Kristen
6	Maestri A	Alice
7	Tesson F	Florian
8	Loubat A	Arthur
9	Chikhi R	Rayan	https://orcid.org/0000-0003-1099-8735
10	Cury J	Jean

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Topics4

NLM's MeSH indexing of the paper, its major topics first.

MeSH term	Major
Evolution, Molecular	Major topic
Bacteriophages	Major topic
Bacteriophage P2	Major topic
Recombination, Genetic

Source PubMed

Grants7

Each grant PubMed's record writes, matched to the NIH project NIH's grant and paper links name for this paper, and each of those links the record does not write.

Grant, as the record writes it	Agency	Stated by
ANR-10-LABX-62-IBEID	Laboratoire d'Excellence IBEID Integrative Biology of Emerging Infectious Diseases	PubMed
ANR-23-CE20-0046-01 TRIADE	Agence Nationale de Recherche	PubMed
ANR-20-CE12-0004	Agence Nationale de Recherche	PubMed
ANR-23-CE35-0006	TransfoConflict	PubMed
	EcoRecEp	PubMed
MSCA-2024-PF-01	HORIZON	PubMed
ANR-23-CE20-0046-01	TriSH	PubMed

Source PubMed

Trials0

The trials whose ClinicalTrials.gov record lists the paper, and the trial numbers the paper's PubMed record names.

None in this release.

Comments and corrections0

PubMed's comments and corrections, NLM's own indexing: retractions first, then expressions of concern, errata and updates, and comments last.

None in this release.

References78

The papers the reference list in PubMed's record names, those in our copy of PubMed, in the list's order.

Order	PMID	Title	Journal	Year	In Papers	Source
1	35,985,290	Bacteriophages benefit from mobilizing pathogenicity islands encoding immune systems against competitors.	Cell	2022	https://conductscience.org/library/papers/35985290	PubMed
2	27,144,088	Bacteriophage P2.	Bacteriophage	2016	https://conductscience.org/library/papers/27144088	PubMed
3	41,252,147	Structural basis for Lamassu-based antiviral immunity and its evolution from DNA repair machinery.	Proc Natl Acad Sci U S A	2025	https://conductscience.org/library/papers/41252147	PubMed
4	41,606,329	A prophage-encoded abortive infection protein preserves host and prophage spread.	Nature	2026	https://conductscience.org/library/papers/41606329	PubMed
5	38,870,898	Going viral: The role of mobile genetic elements in bacterial immunity.	Cell Host Microbe	2024	https://conductscience.org/library/papers/38870898	PubMed
6	37,074,928	PyHMMER: a Python library binding to HMMER for efficient sequence analysis.	Bioinformatics	2023	https://conductscience.org/library/papers/37074928	PubMed
7	9,928,485	Recombination and recombination-dependent DNA replication in bacteriophage T4.	Annu Rev Genet	1998	https://conductscience.org/library/papers/9928485	PubMed
8	37,121,062	Prophages provide a rich source of antiphage defense systems.	Curr Opin Microbiol	2023	https://conductscience.org/library/papers/37121062	PubMed
9	36,869,669	Identification and characterization of thousands of bacteriophage satellites across bacteria.	Nucleic Acids Res	2023	https://conductscience.org/library/papers/36869669	PubMed
10	33,590,101	Bacteria have numerous distinctive groups of phage-plasmids with conserved phage and variable plasmid gene repertoires.	Nucleic Acids Res	2021	https://conductscience.org/library/papers/33590101	PubMed

1 to 10 of 78

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Cited by0

The papers in our copy of PubMed whose reference list names this one, newest first. iCite, which reads more sources, counts 0 citations.

None in this release.

Genes0

The genes the Gene search release ties to the paper: Swiss-Prot's references first, then PubTator's text mining.

None in this release.

Drugs0

The drugs whose trials, in the Pipelines release, list the paper.

None in this release.

Data0

The data bank entries PubMed's record names. Trial numbers are under Trials.

None in this release.

Data dates

The date of each source this release read.

PubMed: 2026-11-06; PubMed
iCite: 2026-11-05; iCite
PMC's ID file: 2026-11-05; PMC's ID file
NIH RePORTER's grant and paper links: 2026-11-01; NIH RePORTER's grant and paper links
Trials: 2026-11-12
Gene search: 2026-11-11
Pipelines: 2026-09-18

Sources 11

ChEMBL, through Open TargetsCC BY-SA 3.0
ClinicalTrials.govNo license stated
HGNCCC0
iCiteCC BY 4.0
NCBI GenePublic domain (US government)
NIH RePORTER's grant and paper linksPublic domain
Open TargetsCC0 1.0
PMC's ID filePublic domain (US government)
PubMedNLM's terms
PubTator 3Public domain
UniProtCC BY 4.0

Each source's terms

ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
ClinicalTrials.govnone stated
HGNCCC0: https://www.genenames.org/about/license/
iCiteCC BY 4.0
NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
NIH RePORTER's grant and paper linksPublic domain (NIH RePORTER)
Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
PMC's ID fileNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
PubMedNLM's terms
PubTator 3Public domain
UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license

ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.

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