ConductScience.org, home
Papers
API referenceFor AI assistants

Paper · 23202128

Integrated genomic analyses identify ARID1A and ARID1B alterations in the childhood cancer neuroblastoma.

Sausen M and 13 others. Nat Genet, 2013. Cited by 348 papers, by iCite.

11 sourcespapers-2026-11-12-0.1.0

Download JSON
Cite this record

ConductScience Library. Integrated genomic analyses identify ARID1A and ARID1B alterations in the childhood cancer neuroblastoma. Papers, record 23202128. Release papers-2026-11-12-0.1.0, 12 Nov 2026. https://conductscience.org/library/papers/23202128

On this page

Paper

PubMed's record of the paper, with iCite's citation figures. No abstract is shown.

Title
Integrated genomic analyses identify ARID1A and ARID1B alterations in the childhood cancer neuroblastoma.
PubMed
Journal
Nat Genet
PubMed
Year
2013
PubMed
Publication types
Journal Article, Research Support, N.I.H., Extramural, Research Support, Non-U.S. Gov't
PubMed
Citations, by iCite
348
iCite
Relative citation ratio, by iCite
8.17
iCite
Revised in PubMed
2022-04-09
PubMed

Authors14

The authors in the order PubMed's record lists them, with the ORCID iDs it states.

OrderAuthorForenameKindORCID iD
1Sausen MMark
2Leary RJRebecca J
3Jones SSiân
4Wu JJian
5Reynolds CPC Patrick
6Liu XXueyuan
7Blackford AAmanda
8Parmigiani GGiovanni
9Diaz LA JrLuis A
10Papadopoulos NNickolas

1 to 10 of 14Source PubMed

See all 14 authors

Topics15

NLM's MeSH indexing of the paper, its major topics first.

MeSH termMajor
DNA-Binding ProteinsMajor topic
MutationMajor topic
NeuroblastomaMajor topic
Nuclear ProteinsMajor topic
Transcription FactorsMajor topic
Biomarkers, Tumor
Cell Line, Tumor
Child
DNA Copy Number Variations
Exome
Gene Expression Profiling
Gene Order
Genomics
Humans
Sequence Analysis, DNA

Source PubMed

Grants4

Each grant PubMed's record writes, matched to the NIH project NIH's grant and paper links name for this paper, and each of those links the record does not write.

Grant, as the record writes itAgencyCountryNIH projectStated bySource
R01 CA121113NCI NIH HHSUnited StatesR01CA121113PubMed and NIHNIH RePORTER
R37 CA043460NCI NIH HHSUnited StatesR37CA043460PubMed and NIHNIH RePORTER
R37 CA057345NCI NIH HHSUnited StatesR37CA057345PubMed and NIHNIH RePORTER
CA121113NCI NIH HHSUnited StatesR01CA121113PubMed and NIHNIH RePORTER

Trials0

The trials whose ClinicalTrials.gov record lists the paper, and the trial numbers the paper's PubMed record names.

None in this release.

Comments and corrections0

PubMed's comments and corrections, NLM's own indexing: retractions first, then expressions of concern, errata and updates, and comments last.

None in this release.

References50

The papers the reference list in PubMed's record names, those in our copy of PubMed, in the list's order.

OrderPMIDTitleJournalYearIn PapersSource
118,724,359Identification of ALK as a major familial neuroblastoma predisposition gene.Nature2008https://conductscience.org/library/papers/18724359PubMed
212,097,268Circulating MYCN DNA as a tumor-specific marker in neuroblastoma patients.Cancer Res2002https://conductscience.org/library/papers/12097268PubMed
320,981,092A map of human genome variation from population-scale sequencing.Nature2010https://conductscience.org/library/papers/20981092PubMed
421,798,897Exome sequencing of head and neck squamous cell carcinoma reveals inactivating mutations in NOTCH1.Science2011https://conductscience.org/library/papers/21798897PubMed
516,959,974The consensus coding sequences of human breast and colorectal cancers.Science2006https://conductscience.org/library/papers/16959974PubMed
622,286,216Somatic histone H3 alterations in pediatric diffuse intrinsic pontine gliomas and non-brainstem glioblastomas.Nat Genet2012https://conductscience.org/library/papers/22286216PubMed
722,722,829Novel mutations target distinct subgroups of medulloblastoma.Nature2012https://conductscience.org/library/papers/22722829PubMed
820,826,764Frequent mutations of chromatin remodeling gene ARID1A in ovarian clear cell carcinoma.Science2010https://conductscience.org/library/papers/20826764PubMed
922,286,061Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma.Nature2012https://conductscience.org/library/papers/22286061PubMed
1022,722,201The landscape of cancer genes and mutational processes in breast cancer.Nature2012https://conductscience.org/library/papers/22722201PubMed

1 to 10 of 50

See all 50 references

Cited by258

The papers in our copy of PubMed whose reference list names this one, newest first. iCite, which reads more sources, counts 348 citations.

PMIDTitleJournalYearIn PapersSource
42,558,373Infantile giant intracranial-extracranial communicating mixed germ cell tumor with ARID1B gene mutation: a case report.Front Oncol2026https://conductscience.org/library/papers/42558373PubMed
42,524,535The Role of Precision Medicine in Neuroblastoma: Targeted Therapies and Personalized Approaches-A Narrative Review.Health Sci Rep2026https://conductscience.org/library/papers/42524535PubMed
42,272,085A Bayesian-Based Integrative Bioinformatics Analysis Nominates Oncogenic Drivers in Neuroblastoma.Clin Transl Sci2026https://conductscience.org/library/papers/42272085PubMed
42,010,939Next generation sequencing identifies novel gene alterations with potential prognostic relevance in pediatric cancer: a single-center study.Oncologist2026https://conductscience.org/library/papers/42010939PubMed
41,890,906Epigenetic crosstalk in neuroblastoma development and progression.Front Cell Dev Biol2026https://conductscience.org/library/papers/41890906PubMed
41,825,442The landscape of structural variation in pediatric cancer.Cancer Cell2026https://conductscience.org/library/papers/41825442PubMed
41,030,971The landscape of structural variation in pediatric cancer.bioRxiv2025https://conductscience.org/library/papers/41030971PubMed
41,001,036Significance of ARID1A in neuroblastoma onset mechanism.Front Oncol2025https://conductscience.org/library/papers/41001036PubMed
40,831,912Cell state plasticity in neuroblastoma.EJC Paediatr Oncol2024https://conductscience.org/library/papers/40831912PubMed
40,774,224High-dose DFMO alters protein translation in neuroblastoma.Neoplasia2025https://conductscience.org/library/papers/40774224PubMed

1 to 10 of 258

See all 258 cited by

Genes35

The genes the Gene search release ties to the paper: Swiss-Prot's references first, then PubTator's text mining.

GeneNCBI Gene IDLinked byIn GenesSource
ALK238PubTator's text mininghttps://conductscience.org/library/genes/238NCBI Gene
ANKRD34B340,120PubTator's text mininghttps://conductscience.org/library/genes/340120NCBI Gene
APPBP210,513PubTator's text mininghttps://conductscience.org/library/genes/10513NCBI Gene
ARID1A8,289PubTator's text mininghttps://conductscience.org/library/genes/8289NCBI Gene
ARID1B57,492PubTator's text mininghttps://conductscience.org/library/genes/57492NCBI Gene
ATRX546PubTator's text mininghttps://conductscience.org/library/genes/546NCBI Gene
CREBBP1,387PubTator's text mininghttps://conductscience.org/library/genes/1387NCBI Gene
DAXX1,616PubTator's text mininghttps://conductscience.org/library/genes/1616NCBI Gene
EGFR1,956PubTator's text mininghttps://conductscience.org/library/genes/1956NCBI Gene
EP3002,033PubTator's text mininghttps://conductscience.org/library/genes/2033NCBI Gene

1 to 10 of 35

See all 35 genes

Drugs0

The drugs whose trials, in the Pipelines release, list the paper.

None in this release.

Data1

The data bank entries PubMed's record names. Trial numbers are under Trials.

Data bankAccession
GEOGSE3960

Source GEO

Data dates

The date of each source this release read.

PubMed
2026-11-06
PubMed
iCite
2026-11-05
iCite
PMC's ID file
2026-11-05
PMC's ID file
NIH RePORTER's grant and paper links
2026-11-01
NIH RePORTER's grant and paper links
Trials
2026-11-12
Gene search
2026-11-11
Pipelines
2026-09-18

Sources 11

  • ChEMBL, through Open TargetsCC BY-SA 3.0
  • ClinicalTrials.govNo license stated
  • HGNCCC0
  • iCiteCC BY 4.0
  • NCBI GenePublic domain (US government)
  • NIH RePORTER's grant and paper linksPublic domain
  • Open TargetsCC0 1.0
  • PMC's ID filePublic domain (US government)
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0
Each source's terms
  • ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • ClinicalTrials.govnone stated
  • HGNCCC0: https://www.genenames.org/about/license/
  • iCiteCC BY 4.0
  • NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • NIH RePORTER's grant and paper linksPublic domain (NIH RePORTER)
  • Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • PMC's ID fileNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license

ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.

For software

Read this paper from software.

The record and each of its lists are JSON, twenty rows a page. No key.

GET https://conductscience.org/api/papers/v1/23202128

GET https://conductscience.org/api/papers/v1/23202128/references?page=2

API referenceFor AI assistants