Paper · 36980855

Integrating Whole-Genome Resequencing and RNA Sequencing Data Reveals Selective Sweeps and Differentially Expressed Genes Related to Nervous System Changes in Luxi Gamecocks.

Zhou J and 4 others. Genes (Basel), 2023. Cited by 9 papers, by iCite.

11 sourcespapers-2026-11-12-0.1.0

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ConductScience Library. Integrating Whole-Genome Resequencing and RNA Sequencing Data Reveals Selective Sweeps and Differentially Expressed Genes Related to Nervous System Changes in Luxi Gamecocks. Papers, record 36980855. Release papers-2026-11-12-0.1.0, 12 Nov 2026. https://conductscience.org/library/papers/36980855

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Paper

PubMed's record of the paper, with iCite's citation figures. No abstract is shown.

Title: Integrating Whole-Genome Resequencing and RNA Sequencing Data Reveals Selective Sweeps and Differentially Expressed Genes Related to Nervous System Changes in Luxi Gamecocks.; PubMed
Journal: Genes (Basel); PubMed
Year: 2023; PubMed
Publication types: Journal Article, Research Support, Non-U.S. Gov't; PubMed
PubMed: https://pubmed.ncbi.nlm.nih.gov/36980855/; PubMed
DOI: https://doi.org/10.3390/genes14030584; PubMed
PMC: https://pmc.ncbi.nlm.nih.gov/articles/PMC10048732/; PubMed
The journal: https://conductscience.org/library/journal-index/101551097; PubMed
Citations, by iCite: 9; iCite
Relative citation ratio, by iCite: 1.25; iCite
Revised in PubMed: 2023-04-24; PubMed

Authors5

The authors in the order PubMed's record lists them, with the ORCID iDs it states.

Order	Author	Forename	ORCID iD
1	Zhou J	Jieke
2	Chang Y	Ying
3	Li J	Junying
4	Bao H	Haigang	https://orcid.org/0000-0003-4591-3957
5	Wu C	Changxin

Source PubMed

Topics10

NLM's MeSH indexing of the paper, its major topics first.

MeSH term	Major
Chickens	Major topic
Carboxy-Lyases	Major topic
Animals
Humans
Base Sequence
Sequence Analysis, DNA
Sequence Analysis, RNA
Nervous System
Membrane Proteins
Chloride-Bicarbonate Antiporters

Source PubMed

Grants0

Each grant PubMed's record writes, matched to the NIH project NIH's grant and paper links name for this paper, and each of those links the record does not write.

None in this release.

Trials0

The trials whose ClinicalTrials.gov record lists the paper, and the trial numbers the paper's PubMed record names.

None in this release.

Comments and corrections0

PubMed's comments and corrections, NLM's own indexing: retractions first, then expressions of concern, errata and updates, and comments last.

None in this release.

References66

The papers the reference list in PubMed's record names, those in our copy of PubMed, in the list's order.

Order	PMID	Title	Journal	Year	In Papers	Source
1	28,187,160	The effects of dopamine receptor 1 and 2 agonists and antagonists on sexual and aggressive behaviors in male green anoles.	PLoS One	2017	https://conductscience.org/library/papers/28187160	PubMed
2	35,290,889	A novel brain-penetrant oral UGT8 inhibitor decreases in vivo galactosphingolipid biosynthesis in murine Krabbe disease.	Biomed Pharmacother	2022	https://conductscience.org/library/papers/35290889	PubMed
3	20,080,505	Fast and accurate long-read alignment with Burrows-Wheeler transform.	Bioinformatics	2010	https://conductscience.org/library/papers/20080505	PubMed
4	25,374,355	The neurology of mTOR.	Neuron	2014	https://conductscience.org/library/papers/25374355	PubMed
5	22,728,672	A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3.	Fly (Austin)	2012	https://conductscience.org/library/papers/22728672	PubMed
6	14,604,808	Where is the origin of the Japanese gamecocks?	Gene	2003	https://conductscience.org/library/papers/14604808	PubMed
7	19,004,851	Cross-repressive interactions between Lrig3 and netrin 1 shape the architecture of the inner ear.	Development	2008	https://conductscience.org/library/papers/19004851	PubMed
8	4,711,903	Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms.	Genetics	1973	https://conductscience.org/library/papers/4711903	PubMed
9	24,991,953	Neuregulin-ERBB signaling in the nervous system and neuropsychiatric diseases.	Neuron	2014	https://conductscience.org/library/papers/24991953	PubMed
10	25,446,560	Serotonin: a never-ending story.	Eur J Pharmacol	2015	https://conductscience.org/library/papers/25446560	PubMed

1 to 10 of 66

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Cited by6

The papers in our copy of PubMed whose reference list names this one, newest first. iCite, which reads more sources, counts 9 citations.

PMID	Title	Journal	Year	In Papers	Source
42,791,693	Selection Signatures from RAD-Seq Reveal Candidate Genomic Regions Potentially Underlying Immune and Adaptive Traits in Southwest Chinese Local Chickens.	Animals (Basel)	2026	https://conductscience.org/library/papers/42791693	PubMed
41,629,769	Genomic signatures of environmental adaptation in Danzhou chickens.	BMC Genomics	2026	https://conductscience.org/library/papers/41629769	PubMed
40,906,375	Genetic Signatures of Competitive Performance in Burmese Gamecocks: A Transcriptomic Analysis.	Biology (Basel)	2025	https://conductscience.org/library/papers/40906375	PubMed
39,920,786	Population structure, selection signal and introgression of gamecocks revealed by whole genome sequencing.	J Anim Sci Biotechnol	2025	https://conductscience.org/library/papers/39920786	PubMed
39,627,295	Temporal changes of neurobehavior in rats following varied blast magnitudes and screening of serum biomarkers in early stage of brain injury.	Sci Rep	2024	https://conductscience.org/library/papers/39627295	PubMed
38,962,700	Molecular genetic identification of Wuzhishan ant chicken, a newly discovered resource in China.	Front Vet Sci	2024	https://conductscience.org/library/papers/38962700	PubMed

Genes20

The genes the Gene search release ties to the paper: Swiss-Prot's references first, then PubTator's text mining.

Gene	NCBI Gene ID	Linked by	In Genes	Source
ADRA1D	146	PubTator's text mining	https://conductscience.org/library/genes/146	NCBI Gene
ADRA2A	150	PubTator's text mining	https://conductscience.org/library/genes/150	NCBI Gene
ATP23	91,419	PubTator's text mining	https://conductscience.org/library/genes/91419	NCBI Gene
C5orf22	55,322	PubTator's text mining	https://conductscience.org/library/genes/55322	NCBI Gene
CCN4	8,840	PubTator's text mining	https://conductscience.org/library/genes/8840	NCBI Gene
DRD1	1,812	PubTator's text mining	https://conductscience.org/library/genes/1812	NCBI Gene
DRD2	1,813	PubTator's text mining	https://conductscience.org/library/genes/1813	NCBI Gene
DRD3	1,814	PubTator's text mining	https://conductscience.org/library/genes/1814	NCBI Gene
GADL1	339,896	PubTator's text mining	https://conductscience.org/library/genes/339896	NCBI Gene
IL1RAPL1	11,141	PubTator's text mining	https://conductscience.org/library/genes/11141	NCBI Gene

1 to 10 of 20

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Drugs0

The drugs whose trials, in the Pipelines release, list the paper.

None in this release.

Data0

The data bank entries PubMed's record names. Trial numbers are under Trials.

None in this release.

Data dates

The date of each source this release read.

PubMed: 2026-11-06; PubMed
iCite: 2026-11-05; iCite
PMC's ID file: 2026-11-05; PMC's ID file
NIH RePORTER's grant and paper links: 2026-11-01; NIH RePORTER's grant and paper links
Trials: 2026-11-12
Gene search: 2026-11-11
Pipelines: 2026-09-18

Sources 11

ChEMBL, through Open TargetsCC BY-SA 3.0
ClinicalTrials.govNo license stated
HGNCCC0
iCiteCC BY 4.0
NCBI GenePublic domain (US government)
NIH RePORTER's grant and paper linksPublic domain
Open TargetsCC0 1.0
PMC's ID filePublic domain (US government)
PubMedNLM's terms
PubTator 3Public domain
UniProtCC BY 4.0

Each source's terms

ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
ClinicalTrials.govnone stated
HGNCCC0: https://www.genenames.org/about/license/
iCiteCC BY 4.0
NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
NIH RePORTER's grant and paper linksPublic domain (NIH RePORTER)
Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
PMC's ID fileNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
PubMedNLM's terms
PubTator 3Public domain
UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license

ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.

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