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Paper · 25417114

Integrated genomic characterization of papillary thyroid carcinoma.

Cancer Genome Atlas Research Network. Cell, 2014. Cited by 2,513 papers, by iCite.

11 sourcespapers-2026-11-12-0.1.0

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ConductScience Library. Integrated genomic characterization of papillary thyroid carcinoma. Papers, record 25417114. Release papers-2026-11-12-0.1.0, 12 Nov 2026. https://conductscience.org/library/papers/25417114

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Paper

PubMed's record of the paper, with iCite's citation figures. No abstract is shown.

Title
Integrated genomic characterization of papillary thyroid carcinoma.
PubMed
Journal
Cell
PubMed
Year
2014
PubMed
Publication types
Journal Article, Research Support, N.I.H., Extramural
PubMed
Citations, by iCite
2,513
iCite
Relative citation ratio, by iCite
76.1
iCite
Revised in PubMed
2026-05-18
PubMed

Authors1

The authors in the order PubMed's record lists them, with the ORCID iDs it states.

OrderAuthorForenameKindORCID iD
1Cancer Genome Atlas Research NetworkGroup

Source PubMed

Topics9

NLM's MeSH indexing of the paper, its major topics first.

MeSH termMajor
CarcinomaMajor topic
MutationMajor topic
Thyroid NeoplasmsMajor topic
Carcinoma, Papillary
DNA Copy Number Variations
Gene Fusion
Humans
Thyroid Cancer, Papillary
Thyroid Gland

Source PubMed

Grants41

Each grant PubMed's record writes, matched to the NIH project NIH's grant and paper links name for this paper, and each of those links the record does not write.

Grant, as the record writes itAgencyCountryNIH projectStated bySource
P30CA16672NCI NIH HHSUnited StatesP30CA016672PubMed and NIHNIH RePORTER
UL1 TR000005NCATS NIH HHSUnited StatesUL1TR000005PubMed and NIHNIH RePORTER
P30 CA016672NCI NIH HHSUnited StatesP30CA016672PubMed and NIHNIH RePORTER
5U24CA143843NCI NIH HHSUnited StatesU24CA143843PubMed and NIHNIH RePORTER
U24 CA143882NCI NIH HHSUnited StatesU24CA143882PubMed and NIHNIH RePORTER
U54 HG003067NHGRI NIH HHSUnited StatesU54HG003067PubMed and NIHNIH RePORTER
U54HG003273NHGRI NIH HHSUnited StatesU54HG003273PubMed and NIHNIH RePORTER
U24 CA143835NCI NIH HHSUnited StatesU24CA143835PubMed and NIHNIH RePORTER
5U24CA143840NCI NIH HHSUnited StatesU24CA143840PubMed and NIHNIH RePORTER
P30 CA046592NCI NIH HHSUnited StatesP30CA046592PubMed and NIHNIH RePORTER

1 to 10 of 41

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Trials2

The trials whose ClinicalTrials.gov record lists the paper, and the trial numbers the paper's PubMed record names.

TrialTitleThe trial lists it asNamed in the paper's recordSource
NCT05752669Oxidative Stress and Mitochondrial TERT in Papillary Thyroid Cancer.BackgroundClinicalTrials.gov
NCT06133374Concordance of Molecular Classification Based on Fine Needle Biopsy (FNB) and Surgical SamplesBackgroundClinicalTrials.gov

Comments and corrections2

PubMed's comments and corrections, NLM's own indexing: retractions first, then expressions of concern, errata and updates, and comments last.

KindPMIDTitleIn PapersSource
Comment in25,384,944Genetics: The Cancer Genome Atlas maps papillary thyroid cancer.https://conductscience.org/library/papers/25384944PubMed
Comment in25,421,371Genetics: The genomic landscape of papillary thyroid carcinoma.https://conductscience.org/library/papers/25421371PubMed

References71

The papers the reference list in PubMed's record names, those in our copy of PubMed, in the list's order.

OrderPMIDTitleJournalYearIn PapersSource
124,079,833MicroRNAs in cancer.Annu Rev Pathol2014https://conductscience.org/library/papers/24079833PubMed
224,248,188The increase in thyroid cancer incidence during the last four decades is accompanied by a high frequency of BRAF mutations and a sharp increase in RAS mutations.J Clin Endocrinol Metab2014https://conductscience.org/library/papers/24248188PubMed
324,423,287Genome-wide methylation patterns in papillary thyroid cancer are distinct based on histological subtype and tumor genotype.J Clin Endocrinol Metab2014https://conductscience.org/library/papers/24423287PubMed
423,571,588Association between BRAF V600E mutation and mortality in patients with papillary thyroid cancer.JAMA2013https://conductscience.org/library/papers/23571588PubMed
523,422,095New strategies in diagnosing cancer in thyroid nodules: impact of molecular markers.Clin Cancer Res2013https://conductscience.org/library/papers/23422095PubMed
623,533,233Clinical outcomes and molecular profile of differentiated thyroid cancers with radioiodine-avid distant metastases.J Clin Endocrinol Metab2013https://conductscience.org/library/papers/23533233PubMed
723,649,806Gain-of-function mutations of PPM1D/Wip1 impair the p53-dependent G1 checkpoint.J Cell Biol2013https://conductscience.org/library/papers/23649806PubMed
823,625,203BRAF and RAS mutations in follicular variants of papillary thyroid carcinoma.Endocr Pathol2013https://conductscience.org/library/papers/23625203PubMed
910,958,784PAX8-PPARgamma1 fusion oncogene in human thyroid carcinoma [corrected].Science2000https://conductscience.org/library/papers/10958784PubMed
1025,166,867Guided visual exploration of genomic stratifications in cancer.Nat Methods2014https://conductscience.org/library/papers/25166867PubMed

1 to 10 of 71

See all 71 references

Cited by1,740

The papers in our copy of PubMed whose reference list names this one, newest first. iCite, which reads more sources, counts 2,513 citations.

PMIDTitleJournalYearIn PapersSource
42,963,735Single-cell RNA-seq reveals SPP1+ tumor-associated macrophage population associated with collagen remodeling in anaplastic thyroid cancer.BMC Cancer2026https://conductscience.org/library/papers/42963735PubMed
42,959,152Isolated TERT promoter mutation may define a high-risk prognostic subgroup in papillary thyroid carcinoma: an exploratory, hypothesis-generating analysis of TCGA and GSE33630 datasets.Front Endocrinol (Lausanne)2026https://conductscience.org/library/papers/42959152PubMed
42,952,532Diagnostic performance of next-generation sequencing in thyroid nodules and molecular correlates of tumor aggressiveness in papillary thyroid carcinoma.Front Endocrinol (Lausanne)2026https://conductscience.org/library/papers/42952532PubMed
42,938,938Transcriptomic Convergence Reveals Tumour-Specific Stromal Remodelling in Immune-Enriched Papillary Thyroid Carcinoma.Cancers (Basel)2026https://conductscience.org/library/papers/42938938PubMed
42,938,348Long Non-Coding RNA LINC01614 Promotes Aggressive Phenotypes and Ferroptosis Resistance in Papillary Thyroid Cancer Through a Putative miR-4521/IGF2/PI3K-AKT Signaling Axis.Genes (Basel)2026https://conductscience.org/library/papers/42938348PubMed
42,934,462IGF2BP3-Overexpressing Follicular Cell-derived Thyroid Tumors Consist of Low-risk Follicular Patterned Tumors with Frequent HBME-1 Negativity and Distinct Cytomorphologic Features.Endocr Pathol2026https://conductscience.org/library/papers/42934462PubMed
42,922,834Cross-scale genetic, molecular, and cellular triangulation prioritizes ACSL5 as a T3-responsive candidate linking hypothyroidism liability to anemia.Front Endocrinol (Lausanne)2026https://conductscience.org/library/papers/42922834PubMed
42,919,442Oncogenic RAS as an adaptive signaling ecosystem: context-dependent vulnerabilities and resistance-informed therapeutic design.Exp Hematol Oncol2026https://conductscience.org/library/papers/42919442PubMed
42,919,130meth-SemiCancer2: a cancer subtyping framework leveraging domain adaptation with contrastive learning for batch effect correction in DNA methylation profiles.BMC Bioinformatics2026https://conductscience.org/library/papers/42919130PubMed
42,909,234Comparative clinical and molecular profiling of papillary thyroid carcinomas with unilateral and bilateral lateral lymph node metastasis: a retrospective cohort study.Ann Surg Treat Res2026https://conductscience.org/library/papers/42909234PubMed

1 to 10 of 1,740

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Genes82

The genes the Gene search release ties to the paper: Swiss-Prot's references first, then PubTator's text mining.

GeneNCBI Gene IDLinked byIn GenesSource
AKT1207PubTator's text mininghttps://conductscience.org/library/genes/207NCBI Gene
ALK238PubTator's text mininghttps://conductscience.org/library/genes/238NCBI Gene
APC324PubTator's text mininghttps://conductscience.org/library/genes/324NCBI Gene
ARAF369PubTator's text mininghttps://conductscience.org/library/genes/369NCBI Gene
ARID1B57,492PubTator's text mininghttps://conductscience.org/library/genes/57492NCBI Gene
ATM472PubTator's text mininghttps://conductscience.org/library/genes/472NCBI Gene
BCL2596PubTator's text mininghttps://conductscience.org/library/genes/596NCBI Gene
BDP155,814PubTator's text mininghttps://conductscience.org/library/genes/55814NCBI Gene
BRAF673PubTator's text mininghttps://conductscience.org/library/genes/673NCBI Gene
BRCA2675PubTator's text mininghttps://conductscience.org/library/genes/675NCBI Gene

1 to 10 of 82

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Drugs0

The drugs whose trials, in the Pipelines release, list the paper.

None in this release.

Data0

The data bank entries PubMed's record names. Trial numbers are under Trials.

None in this release.

Data dates

The date of each source this release read.

PubMed
2026-11-06
PubMed
iCite
2026-11-05
iCite
PMC's ID file
2026-11-05
PMC's ID file
NIH RePORTER's grant and paper links
2026-11-01
NIH RePORTER's grant and paper links
Trials
2026-11-12
Gene search
2026-11-11
Pipelines
2026-09-18

Sources 11

  • ChEMBL, through Open TargetsCC BY-SA 3.0
  • ClinicalTrials.govNo license stated
  • HGNCCC0
  • iCiteCC BY 4.0
  • NCBI GenePublic domain (US government)
  • NIH RePORTER's grant and paper linksPublic domain
  • Open TargetsCC0 1.0
  • PMC's ID filePublic domain (US government)
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0
Each source's terms
  • ChEMBL, through Open TargetsCC BY-SA 3.0, for the parts from ChEMBL. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • ClinicalTrials.govnone stated
  • HGNCCC0: https://www.genenames.org/about/license/
  • iCiteCC BY 4.0
  • NCBI GeneNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • NIH RePORTER's grant and paper linksPublic domain (NIH RePORTER)
  • Open TargetsCC0 1.0. Open Targets asks that users cite its latest paper: Buniello et al. 2025, Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery, Nucleic Acids Research 53(D1):D1467, PMID 39657122. Read on 8 Nov 2026 at https://platform-docs.opentargets.org/licence
  • PMC's ID fileNone named for the file. NCBI says information created by or for the US government on its site is in the public domain, and asks that NLM be acknowledged: https://www.ncbi.nlm.nih.gov/home/about/policies/
  • PubMedNLM's terms
  • PubTator 3Public domain
  • UniProtCC BY 4.0. UniProt's licence file: "All databases and documents in the UniProt FTP directory may be copied and redistributed freely, without advance permission, provided that this copyright statement is reproduced with each copy." UniProt asks that users cite its latest paper: The UniProt Consortium, UniProt: the Universal Protein Knowledgebase in 2025, Nucleic Acids Research 53:D609-D617, https://doi.org/10.1093/nar/gkae1010. Read on 9 Nov 2026 at https://www.uniprot.org/help/license

ClinicalTrials.gov's data carry an international copyright outside the United States: https://clinicaltrials.gov/about-site/terms-conditions.

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